Bump the requirements group across 1 directory with 11 updates by dependabot[bot] · Pull Request #2858 · zarr-developers/zarr-python

dependabot · 2025-02-24T05:06:38Z

Bumps the requirements group with 11 updates in the / directory:

Package	From	To
numpy	`2.1.2`	`2.2.3`
numcodecs	`0.13.1`	`0.15.1`
setuptools-scm	`8.1.0`	`8.2.0`
pytest	`8.3.3`	`8.3.4`
lmdb	`1.5.1`	`1.6.2`
azure-storage-blob	`12.21.0`	`12.24.1`
redis	`5.1.1`	`5.2.1`
pymongo	`4.10.1`	`4.11.1`
pytest-cov	`5.0.0`	`6.0.0`
pytest-doctestplus	`1.3.0`	`1.4.0`
h5py	`3.12.1`	`3.13.0`

Updates numpy from 2.1.2 to 2.2.3

Release notes

Sourced from numpy's releases.

2.2.3 (Feb 13, 2025)

NumPy 2.2.3 Release Notes

NumPy 2.2.3 is a patch release that fixes bugs found after the 2.2.2 release. The majority of the changes are typing improvements and fixes for free threaded Python. Both of those areas are still under development, so if you discover new problems, please report them.

This release supports Python versions 3.10-3.13.

Contributors

A total of 9 people contributed to this release. People with a "+" by their names contributed a patch for the first time.

!amotzop

Charles Harris

Chris Sidebottom

Joren Hammudoglu

Matthew Brett

Nathan Goldbaum

Raghuveer Devulapalli

Sebastian Berg

Yakov Danishevsky +

Pull requests merged

A total of 21 pull requests were merged for this release.

#28185: MAINT: Prepare 2.2.x for further development

#28201: BUG: fix data race in a more minimal way on stable branch

#28208: BUG: Fix from_float_positional errors for huge pads

#28209: BUG: fix data race in np.repeat

#28212: MAINT: Use VQSORT_COMPILER_COMPATIBLE to determine if we should...

#28224: MAINT: update highway to latest

#28236: BUG: Add cpp atomic support (#28234)

#28237: BLD: Compile fix for clang-cl on WoA

#28243: TYP: Avoid upcasting float64 in the set-ops

#28249: BLD: better fix for clang / ARM compiles

#28266: TYP: Fix timedelta64.__divmod__ and timedelta64.__mod__...

#28274: TYP: Fixed missing typing information of set_printoptions

#28278: BUG: backport resource cleanup bugfix from gh-28273

#28282: BUG: fix incorrect bytes to stringdtype coercion

#28283: TYP: Fix scalar constructors

#28284: TYP: stub numpy.matlib

#28285: TYP: stub the missing numpy.testing modules

#28286: CI: Fix the github label for TYP: PR's and issues

#28305: TYP: Backport typing updates from main

#28321: BUG: fix race initializing legacy dtype casts

#28324: CI: update test_moderately_small_alpha

... (truncated)

Commits

a274561 Merge pull request #28322 from charris/prepare-2.2.3
5ab0f71 REL: Prepare for the NumPy 2.2.3 release [wheel build]
010ad9b Merge pull request #28324 from charris/update-test_dirichlet_moderately_small...
6338746 CI: update test_moderately_small_alpha [wheel build]
56f8d5b Merge pull request #28321 from charris/backport-28290
48515a3 MAINT: Update some testing files from main
96ca7e3 MAINT: respond to code review
c20ac88 MAINT: use a try/finally to make the deadlock protection more robust
d494647 MAINT: fix indentation and clarify comment
3f8fbd6 MAINT: go back to try/except
Additional commits viewable in compare view

Updates numcodecs from 0.13.1 to 0.15.1

Release notes

Sourced from numcodecs's releases.

v0.15.1

What's Changed

Remove id from zarr3 config serialization by @normanrz in zarr-developers/numcodecs#685

Enable some stricter typing rules by @dstansby in zarr-developers/numcodecs#679

Apply ruff preview rule RUF046 by @DimitriPapadopoulos in zarr-developers/numcodecs#687

chore: update pre-commit hooks by @pre-commit-ci in zarr-developers/numcodecs#682

Minor UX improvement: Add the UnknownCodecError. by @cwognum in zarr-developers/numcodecs#689

Update release notes post 0.15.0 by @dstansby in zarr-developers/numcodecs#692

chore: update pre-commit hooks by @pre-commit-ci in zarr-developers/numcodecs#696

Upgrade ruff to 0.9.1 by @DimitriPapadopoulos in zarr-developers/numcodecs#688

Don't overwrite codec config values when set. by @dcherian in zarr-developers/numcodecs#700

New Contributors

@cwognum made their first contribution in zarr-developers/numcodecs#689

@dcherian made their first contribution in zarr-developers/numcodecs#700

Full Changelog: zarr-developers/numcodecs@v0.15.0...v0.15.1

v0.15.0

What's Changed

chore: update pre-commit hooks by @pre-commit-ci in zarr-developers/numcodecs#660

Bump pypa/cibuildwheel from 2.21.3 to 2.22.0 by @dependabot in zarr-developers/numcodecs#659

Fail CI if codecov doesn't upload by @dstansby in zarr-developers/numcodecs#638

Enforce ruff/flake8-comprehensions rules (C4) by @DimitriPapadopoulos in zarr-developers/numcodecs#605

Imported name is not used anywhere in the module by @DimitriPapadopoulos in zarr-developers/numcodecs#662

Adds astype config for Delta in Zarr 3 wrapper by @normanrz in zarr-developers/numcodecs#664

chore: update pre-commit hooks by @pre-commit-ci in zarr-developers/numcodecs#665

Only suppress imports of optional external dependencies by @dstansby in zarr-developers/numcodecs#550

Support pcodec v0.3 by @slevang in zarr-developers/numcodecs#639

chore: update pre-commit hooks by @pre-commit-ci in zarr-developers/numcodecs#667

chore: update pre-commit hooks by @pre-commit-ci in zarr-developers/numcodecs#673

Last batch of ruff rules by @DimitriPapadopoulos in zarr-developers/numcodecs#658

Improve pre-commit configuration by @DimitriPapadopoulos in zarr-developers/numcodecs#668

Update pyproject.toml - zfpy Versioning by @me-her in zarr-developers/numcodecs#671

Update numcodecs tests and docs for zarr-python 3.0 by @normanrz in zarr-developers/numcodecs#675

Deprecate blosc helper functions by @dstansby in zarr-developers/numcodecs#619

Simplify conda use in tests by @dstansby in zarr-developers/numcodecs#674

Test on zfpy again by @dstansby in zarr-developers/numcodecs#678

Skip vlen bytes encode none test by @dstansby in zarr-developers/numcodecs#690

Revert change to delta filter by @dstansby in zarr-developers/numcodecs#677

Cleanup PCodec soft dependency by @jakirkham in zarr-developers/numcodecs#647

Update release notes for 0.15.0 by @dstansby in zarr-developers/numcodecs#691

New Contributors

@me-her made their first contribution in zarr-developers/numcodecs#671

Full Changelog: zarr-developers/numcodecs@v0.14.1...v0.15.0

v0.14.1

What's Changed

... (truncated)

Changelog

Sourced from numcodecs's changelog.

Release notes

.. # Unindent the section between releases in order # to document your changes. On releases it will be # re-indented so that it does not show up in the notes.

.. _unreleased: Unreleased

.. _unreleased:

Unreleased

Improvements

* Raise a custom `UnknownCodecError` when trying to retrieve an unavailable codec.
  By :user:`Cas Wognum <cwognum>`.
Fixes
* Remove redundant ``id`` from codec metadata serialization in Zarr3 codecs.
  By :user:`Norman Rzepka &lt;normanrz&gt;`, :issue:`685`
.. _release_0.15.0:
0.15.0
Breaking changes

</code></pre>

<ul>

<li>All arguments to the <code>PCodec</code> constructor except for <code>level</code>

are now keyword only, to support the updated API.

By :user:<code>Sam Levang &lt;slevang&gt;</code>, :issue:<code>623</code></li>

</ul>

<p>Deprecations</p>

<pre><code>The following blosc funcitons are deprecated, with no replacement.

This is because they are not intended to be public API.

numcodecs.blosc.init
numcodecs.blosc.destroy
numcodecs.blosc.compname_to_compcode
numcodecs.blosc.cbuffer_sizes
numcodecs.blosc.cbuffer_metainfo

&lt;/tr&gt;&lt;/table&gt;

</code></pre>

</blockquote>

<p>... (truncated)</p>

</details>

<details>

<summary>Commits</summary>

<ul>

<li><a href="https://github.com/zarr-developers/numcodecs/commit/3cf8ab1f28e6fbda24fa16c33654cf560a8d4ae2&quot;&gt;&lt;code&gt;3cf8ab1&lt;/code&gt;&lt;/a> Don't overwrite codec config values when set. (<a href="https://redirect.github.com/zarr-developers/numcodecs/issues/700&quot;&gt;#700&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/numcodecs/commit/8a0bd3bc6223e338d58ac9cd7bfa1481b2ad85ab&quot;&gt;&lt;code&gt;8a0bd3b&lt;/code&gt;&lt;/a> Upgrade ruff to 0.9.1 (<a href="https://redirect.github.com/zarr-developers/numcodecs/issues/688&quot;&gt;#688&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/numcodecs/commit/b8e40f7ad652ec25e52f976e3931a5f755b93e4b&quot;&gt;&lt;code&gt;b8e40f7&lt;/code&gt;&lt;/a> chore: update pre-commit hooks (<a href="https://redirect.github.com/zarr-developers/numcodecs/issues/696&quot;&gt;#696&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/numcodecs/commit/8d15c0261272d93cf276ce84043c4b5db21ad09e&quot;&gt;&lt;code&gt;8d15c02&lt;/code&gt;&lt;/a> Update release notes post 0.15.0 (<a href="https://redirect.github.com/zarr-developers/numcodecs/issues/692&quot;&gt;#692&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/numcodecs/commit/6d090a3840339d02d71a67aac1001946ab45066b&quot;&gt;&lt;code&gt;6d090a3&lt;/code&gt;&lt;/a> Minor UX improvement: Add the <code>UnknownCodecError</code>. (<a href="https://redirect.github.com/zarr-developers/numcodecs/issues/689&quot;&gt;#689&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/numcodecs/commit/bd517abf42b161cb10666f71081267c5c9ee241a&quot;&gt;&lt;code&gt;bd517ab&lt;/code&gt;&lt;/a> chore: update pre-commit hooks (<a href="https://redirect.github.com/zarr-developers/numcodecs/issues/682&quot;&gt;#682&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/numcodecs/commit/0162bb8ff306865b54240997af610863cfe5d34a&quot;&gt;&lt;code&gt;0162bb8&lt;/code&gt;&lt;/a> Apply ruff preview rule RUF046 (<a href="https://redirect.github.com/zarr-developers/numcodecs/issues/687&quot;&gt;#687&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/numcodecs/commit/ee9a110d2921ea3eb28efd839ef143403bca6bc8&quot;&gt;&lt;code&gt;ee9a110&lt;/code&gt;&lt;/a> Enable some stricter typing rules (<a href="https://redirect.github.com/zarr-developers/numcodecs/issues/679&quot;&gt;#679&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/numcodecs/commit/30155c7ccb5dc51645ae1185bebd887f79468d55&quot;&gt;&lt;code&gt;30155c7&lt;/code&gt;&lt;/a> Remove id from zarr3 config serialization (<a href="https://redirect.github.com/zarr-developers/numcodecs/issues/685&quot;&gt;#685&lt;/a&gt;)&lt;/li>

<li><a href="https://github.com/zarr-developers/numcodecs/commit/7ed1ace3681bf1f34e0011c74120abca4fa822a3&quot;&gt;&lt;code&gt;7ed1ace&lt;/code&gt;&lt;/a> Update release notes for 0.15.0 (<a href="https://redirect.github.com/zarr-developers/numcodecs/issues/691&quot;&gt;#691&lt;/a&gt;)&lt;/li>

<li>Additional commits viewable in <a href="https://github.com/zarr-developers/numcodecs/compare/v0.13.1...v0.15.1&quot;&gt;compare view</a></li>

</ul>

</details>
<br />


Updates setuptools-scm from 8.1.0 to 8.2.0

Changelog
Sourced from setuptools-scm's changelog.

v8.2.0
Added

fix #960: add a --force-write-version-files flag for the cli

Changed

fix #950: ensure to pass encodings to io usage
fix #957 - add subprocess timeout control env var
add sp-repo-review pre-commit hook

Fixed

fix #1018: allow non-normalized versions for semver
fix #1103: respect GIT_CEILING_DIRECTORIES when trying to find git toplevels
fix #1081: add name normalized pipx entrypoint
fix #1080: clean pdm from PYTHONPATH to protect mercurial





Commits

e554978 complete changelog to reasonable accuracy for quick release
260dcf0 chore: scriv collect
836eb42 Merge pull request #1096 from DimitriPapadopoulos/ruff_0.9.1
98b7078 Merge pull request #1106 from Ecordonnier/eco/git-ceiling-directories
7d4e94c Merge pull request #1104 from jezdez/patch-1
0b82e5d [pre-commit.ci] auto fixes from pre-commit.com hooks
979d793 respect GIT_CEILING_DIRECTORIES
68c6b20 Add missing code block end.
9b6f031 Merge pull request #1102 from paugier/error-message-env-var
2b0722f Mention SETUPTOOLS_SCM_PRETEND_VERSION_FOR in error message
Additional commits viewable in compare view




Updates pytest from 8.3.3 to 8.3.4

Release notes
Sourced from pytest's releases.

8.3.4
pytest 8.3.4 (2024-12-01)
Bug fixes


#12592: Fixed KeyError{.interpreted-text role="class"} crash when using --import-mode=importlib in a directory layout where a directory contains a child directory with the same name.


#12818: Assertion rewriting now preserves the source ranges of the original instructions, making it play well with tools that deal with the AST, like executing.


#12849: ANSI escape codes for colored output now handled correctly in pytest.fail{.interpreted-text role="func"} with [pytrace=False]{.title-ref}.


#9353: pytest.approx{.interpreted-text role="func"} now uses strict equality when given booleans.


Improved documentation


#10558: Fix ambiguous docstring of pytest.Config.getoption{.interpreted-text role="func"}.


#10829: Improve documentation on the current handling of the --basetemp option and its lack of retention functionality (temporary directory location and retention{.interpreted-text role="ref"}).


#12866: Improved cross-references concerning the recwarn{.interpreted-text role="fixture"} fixture.


#12966: Clarify filterwarnings{.interpreted-text role="ref"} docs on filter precedence/order when using multiple @pytest.mark.filterwarnings <pytest.mark.filterwarnings ref>{.interpreted-text role="ref"} marks.


Contributor-facing changes

#12497: Fixed two failing pdb-related tests on Python 3.13.




Commits

53f8b4e Update pypa/gh-action-pypi-publish to v1.12.2
98dff36 Prepare release version 8.3.4
1b474e2 approx: use exact comparison for bool (#13013)
b541721 docs: Fix wrong statement about sys.modules with importlib import mode (#1298...
16cb87b pytest.fail: fix ANSI escape codes for colored output (#12959) (#12990)
be6bc81 Issue #12966 Clarify filterwarnings docs on precedence when using multiple ma...
7aeb72b Improve docs on basetemp and retention (#12912) (#12928)
c875841 Merge pull request #12917 from pytest-dev/patchback/backports/8.3.x/ded1f44e5...
6502816 Merge pull request #12913 from jakkdl/dontfailonbadpath
52135b0 Merge pull request #12885 from The-Compiler/pdb-py311 (#12887)
Additional commits viewable in compare view




Updates lmdb from 1.5.1 to 1.6.2

Changelog
Sourced from lmdb's changelog.

2025-01-05 1.6.2

CI-only fix.

2025-01-05 1.6.1

CI-only fix.

2025-01-05 1.6.0


Support for Python 3.13.  Contributed by Miro Hrončok and Adam Williamson.


CI:  Publish 3.13 binaries and Linux aarch64 wheels for multiple versions.





Commits

8c143c3 Bump version for release.
9d4da39 Syntax error
b591f57 Bump version for release.
f30246e Don't publish to Test PyPI if a real release.
8e995be Bump version for release.
bbc3ff7 Merge pull request #371 from jnwatson/3.13-support
92c0d1a Add dependency from publish to build_aarch64
75c01c2 Publish aarch64 wheels
5aacb18 Fix aarch64 stomping on non aarch64 manylinux on upload
9e7c6ab Change version to test publishing works
Additional commits viewable in compare view




Updates azure-storage-blob from 12.21.0 to 12.24.1

Release notes
Sourced from azure-storage-blob's releases.

azure-storage-blob_12.24.1
12.24.1 (2025-01-22)
Bugs Fixed

Fixed an issue where custom transports may encounter AttributeError on certain requests.
Fixed an issue where StorageStreamDownloader(chars=-1) may not return all data.




Commits

79263aa [Storage] update perf tests core baseline (#39336)
d464fa6 [Storage] Jan 22 Patch Fix Release Changelogs (#39330)
8981a8b [AutoRelease] t2-storage-2025-01-15-18312(can only be merged by SDK owner) (#...
3dcbb23 [Storage] Mocking Transport Tests & Fixes (#38948)
5cd5867 Fix urls (#39117)
174f2fd fix reading blob chars in text mode using StorageStreamDownloader.read() (#38...
7e5cdb2 NO_CI configure typing in pyproject.toml for mgmt
bf50574 Remove a bit of Python 2.7 code (#38735)
972ebbb [Storage] Fixed next-mypy for azure-storage-blob, `azure-storage-file-share...
b4e3544 [Storage] Fix for missing expires_on kwarg in request handler (#38767)
Additional commits viewable in compare view




Updates redis from 5.1.1 to 5.2.1

Release notes
Sourced from redis's releases.

5.2.1
Changes
🐛 Bug Fixes

Fixed unsecured tempfile.mktemp() command usage (#3446)
Fixed bug with SLOWLOG GET response parsing on Redis Software (#3441)
Fixed issue with invoking _close() on closed event loop (#3438)

🧰 Maintenance

Migrate test infrastructure to new custom docker images (#3415)
Fixed flacky test with HEXPIREAT command (#3437)

Contributors
We'd like to thank all the contributors who worked on this release!
@IlianIliev @uglide @vladvildanov @teodorfn @akx
5.2.0
Changes
🚀 New Features

Extend AggregateRequest with scorer argument (#3409)

🧰 Maintenance

Pin pytest-profiling version due to the bug (#3417)

Contributors
We'd like to thank all the contributors who worked on this release!
@uglide @rbs333 @vladvildanov @dwdougherty



Commits

a74fa6a Release 5.2.1 (#3451)
166ae7b Updated package version (#3418)
00f5be4 adds scorer to AggregateRequest (#3409)
4c4d4af Pin pytest-profiling (#3417)
d6ddb0d DOC-4199: add TCEs to the combined query page (#3380)
17db62e DOC-4200: add TCEs to the aggregation query page (#3381)
700045c Backport 5.1 changes into master (#3406)
See full diff in compare view




Updates pymongo from 4.10.1 to 4.11.1

Release notes
Sourced from pymongo's releases.

PyMongo 4.11.1
Community notes: https://www.mongodb.com/community/forums/t/pymongo-4-11-1-released/312193
PyMongo 4.11.0
Community notes: https://www.mongodb.com/community/forums/t/pymongo-4-11-released/310976



Changelog
Sourced from pymongo's changelog.

Changes in Version 4.11.1 (2025/MM/DD)

Fixed support for prebuilt ppc64le and s390x wheels.

Changes in Version 4.11.0 (2025/01/28)
.. warning:: PyMongo 4.11 drops support for Python 3.8 and PyPy 3.9: Python 3.9+ or PyPy 3.10+ is now required.
.. warning:: PyMongo 4.11 drops support for MongoDB 3.6. PyMongo now supports MongoDB 4.0+.
Driver support for MongoDB 3.6 reached end of life in April 2024.
.. warning:: Driver support for MongoDB 4.0 reaches end of life in April 2025.
A future minor release of PyMongo will raise the minimum supported MongoDB Server version from 4.0 to 4.2.
This is in accordance with MongoDB Software Lifecycle Schedules.
Support for MongoDB Server 4.0 will be dropped in a future release!
.. warning:: This version does not include wheels for ppc64le or s390x architectures, see PYTHON-5058_ for more information.
PyMongo 4.11 brings a number of changes including:

Dropped support for Python 3.8 and PyPy 3.9.
Dropped support for MongoDB 3.6.
Dropped support for the MONGODB-CR authenticate mechanism, which is no longer supported by MongoDB 4.0+.
pymongocrypt>=1.12 is now required for :ref:In-Use Encryption support.
Added support for free-threaded Python with the GIL disabled. For more information see:
Free-threaded CPython <https://docs.python.org/3.13/whatsnew/3.13.html#whatsnew313-free-threaded-cpython>.
We do not yet support free-threaded Python on Windows (PYTHON-5027) or with In-Use Encryption (PYTHON-5024_).
:attr:~pymongo.asynchronous.mongo_client.AsyncMongoClient.address and
:attr:~pymongo.mongo_client.MongoClient.address now correctly block when called on unconnected clients
until either connection succeeds or a server selection timeout error is raised.
Added :func:repr support to :class:pymongo.operations.IndexModel.
Added :func:repr support to :class:pymongo.operations.SearchIndexModel.
Added sort parameter to
:meth:~pymongo.collection.Collection.update_one, :meth:~pymongo.collection.Collection.replace_one,
:class:~pymongo.operations.UpdateOne, and
:class:~pymongo.operations.UpdateMany,
:meth:~pymongo.mongo_client.MongoClient.bulk_write and
:meth:~pymongo.asynchronous.mongo_client.AsyncMongoClient.bulk_write now throw an error
when ordered=True or verboseResults=True are used with unacknowledged writes.
These are unavoidable breaking changes.
Fixed a bug in :const:bson.json_util.dumps where a :class:bson.datetime_ms.DatetimeMS would
be incorrectly encoded as '{"$date": "X"}' instead of '{"$date": X}' when using the
legacy MongoDB Extended JSON datetime representation.
Fixed a bug where :const:bson.json_util.loads would raise an IndexError when parsing an invalid
"$date" instead of a ValueError.

Issues Resolved
...............
See the PyMongo 4.11 release notes in JIRA_ for the list of resolved issues
in this release.


... (truncated)


Commits

d175edf BUMP 4.11.1
4a6aae8 PYTHON-5125 Prep for 4.11.1 release (#2137)
c83f34c PYTHON-5047 Do not run nightly release check on forks (#2134)
e15b820 PYTHON-5058 Restore alternate architecture builds (#2133)
3c9a248 Update ReadTheDocs to include django-mongodb-backend (#2084)
f1a8af1 PYTHON-5047 Fix dry run logic in releases yet again (#2098)
d030130 PYTHON-5112 - Fix just install (#2095)
ed21a18 PYTHON-5047 Fix dry run logic in releases again (#2092)
cae161e BUMP 4.11
dc29938 PYTHON-5047 Fix dry run logic in releases (#2083)
Additional commits viewable in compare view




Updates pytest-cov from 5.0.0 to 6.0.0

Changelog
Sourced from pytest-cov's changelog.

6.0.0 (2024-10-29)

Updated various documentation inaccuracies, especially on subprocess handling.
Changed fail under checks to use the precision set in the coverage configuration.
Now it will perform the check just like coverage report would.
Added a --cov-precision cli option that can override the value set in your coverage configuration.
Dropped support for now EOL Python 3.8.




Commits

9540437 Bump version: 5.0.0 → 6.0.0
9f81754 Further trim down envs and drop Python 3.8.
b12b5ec Update conf.
23f4b27 Update changelog.
291a04f Bump test deps and trim config.
08f1101 Add --cov-precision option. Close #655.
76fe2a7 Move the warnings/errors in a place that doesn't import anything.
a9ea7b7 Implement error/warning for the bad dynamic_context being set in config.
c299e01 Add explicit suffixing to make it easier to see the identify the sources/usag...
c87e546 Add reproducer for weird xdist dynamic_context interaction. Ref #604.
Additional commits viewable in compare view




Updates pytest-doctestplus from 1.3.0 to 1.4.0

Release notes
Sourced from pytest-doctestplus's releases.

v1.4.0
What's Changed

Bump pypa/gh-action-pypi-publish from 1.11.0 to 1.12.2 in /.github/workflows in the actions group by @dependabot in scientific-python/pytest-doctestplus#275
MAINT: dropping python3.8 support by @bsipocz in scientific-python/pytest-doctestplus#274
Bump pypa/gh-action-pypi-publish from 1.12.2 to 1.12.3 in /.github/workflows in the actions group by @dependabot in scientific-python/pytest-doctestplus#276
Make compatible with pytest-asyncio by @geigerzaehler in scientific-python/pytest-doctestplus#278
ENH: adding doctest-requires-all directive by @bsipocz in scientific-python/pytest-doctestplus#280
ENH: adding doctest-remote-data-all directive by @bsipocz in scientific-python/pytest-doctestplus#281

New Contributors

@geigerzaehler made their first contribution in scientific-python/pytest-doctestplus#278

Full Changelog: https://github.com/scientific-python/pytest-doctestplus/compare/v1.3.0...v1.4.0



Changelog
Sourced from pytest-doctestplus's changelog.

1.4.0 (2025-01-24)


Fixing compatibility with pytest-asyncio. #278


Adding new directive doctest-requires-all to conditionally skip all
doctests in narrative documentations based on availability of
dependencies. #280


Adding new directive doctest-remote-data-all to conditionally skip all
doctests in narrative documentations based on availability of
remote-data. #281


Versions of Python <3.9 are no longer supported. #274





Commits

c1f124c Finalizing changelog for v1.4.0
5e1a479 Merge pull request #281 from bsipocz/doctest-remote-data-all
a7213fb Adding whitespaces
082ef33 TST: adding tests for doctest-remote-data-all
fe2593b DOC: adding changelog
4e647a2 ENH: adding doctest-remote-data-all directive
d620c96 Merge pull request #280 from bsipocz/doctest-requires-all
74cebb8 Cleanup from review
44407a6 DOC: adding changelog
0ac57e8 DOC: adding doctest-requires-all to the docs
Additional commits viewable in compare view




Updates h5py from 3.12.1 to 3.13.0

Commits

c96b93d Merge pull request #2559 from h5py/changelog-3.13
04daabc Add docstring for SpaceId.select_shape_same
0588148 Full import path to low-level method
584b591 Add release notes for 3.13
a04f03c Version number -> 3.13
f416f89 Merge pull request #2517 from takluyver/in-memory
7bc2c19 Use a different make_fapl() parameter to test File.in_memory()
3a7bd67 Add news entry for File.in_memory()
261f609 Fix passing make_fcpl() keyword arguments from File.in_memory()
c8a141b Fix default block size in docs
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Bumps the requirements group with 11 updates in the / directory: | Package | From | To | | --- | --- | --- | | [numpy](https://github.com/numpy/numpy) | `2.1.2` | `2.2.3` | | [numcodecs](https://github.com/zarr-developers/numcodecs) | `0.13.1` | `0.15.1` | | [setuptools-scm](https://github.com/pypa/setuptools-scm) | `8.1.0` | `8.2.0` | | [pytest](https://github.com/pytest-dev/pytest) | `8.3.3` | `8.3.4` | | [lmdb](https://github.com/jnwatson/py-lmdb) | `1.5.1` | `1.6.2` | | [azure-storage-blob](https://github.com/Azure/azure-sdk-for-python) | `12.21.0` | `12.24.1` | | [redis](https://github.com/redis/redis-py) | `5.1.1` | `5.2.1` | | [pymongo](https://github.com/mongodb/mongo-python-driver) | `4.10.1` | `4.11.1` | | [pytest-cov](https://github.com/pytest-dev/pytest-cov) | `5.0.0` | `6.0.0` | | [pytest-doctestplus](https://github.com/scientific-python/pytest-doctestplus) | `1.3.0` | `1.4.0` | | [h5py](https://github.com/h5py/h5py) | `3.12.1` | `3.13.0` | Updates `numpy` from 2.1.2 to 2.2.3 - [Release notes](https://github.com/numpy/numpy/releases) - [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst) - [Commits](numpy/numpy@v2.1.2...v2.2.3) Updates `numcodecs` from 0.13.1 to 0.15.1 - [Release notes](https://github.com/zarr-developers/numcodecs/releases) - [Changelog](https://github.com/zarr-developers/numcodecs/blob/main/docs/release.rst) - [Commits](zarr-developers/numcodecs@v0.13.1...v0.15.1) Updates `setuptools-scm` from 8.1.0 to 8.2.0 - [Release notes](https://github.com/pypa/setuptools-scm/releases) - [Changelog](https://github.com/pypa/setuptools-scm/blob/main/CHANGELOG.md) - [Commits](pypa/setuptools-scm@v8.1.0...v8.2.0) Updates `pytest` from 8.3.3 to 8.3.4 - [Release notes](https://github.com/pytest-dev/pytest/releases) - [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst) - [Commits](pytest-dev/pytest@8.3.3...8.3.4) Updates `lmdb` from 1.5.1 to 1.6.2 - [Changelog](https://github.com/jnwatson/py-lmdb/blob/master/ChangeLog) - [Commits](jnwatson/py-lmdb@py-lmdb_1.5.1...py-lmdb_1.6.2) Updates `azure-storage-blob` from 12.21.0 to 12.24.1 - [Release notes](https://github.com/Azure/azure-sdk-for-python/releases) - [Changelog](https://github.com/Azure/azure-sdk-for-python/blob/main/doc/esrp_release.md) - [Commits](Azure/azure-sdk-for-python@azure-storage-blob_12.21.0...azure-storage-blob_12.24.1) Updates `redis` from 5.1.1 to 5.2.1 - [Release notes](https://github.com/redis/redis-py/releases) - [Changelog](https://github.com/redis/redis-py/blob/master/CHANGES) - [Commits](redis/redis-py@v5.1.1...v5.2.1) Updates `pymongo` from 4.10.1 to 4.11.1 - [Release notes](https://github.com/mongodb/mongo-python-driver/releases) - [Changelog](https://github.com/mongodb/mongo-python-driver/blob/4.11.1/doc/changelog.rst) - [Commits](mongodb/mongo-python-driver@4.10.1...4.11.1) Updates `pytest-cov` from 5.0.0 to 6.0.0 - [Changelog](https://github.com/pytest-dev/pytest-cov/blob/master/CHANGELOG.rst) - [Commits](pytest-dev/pytest-cov@v5.0.0...v6.0.0) Updates `pytest-doctestplus` from 1.3.0 to 1.4.0 - [Release notes](https://github.com/scientific-python/pytest-doctestplus/releases) - [Changelog](https://github.com/scientific-python/pytest-doctestplus/blob/main/CHANGES.rst) - [Commits](scientific-python/pytest-doctestplus@v1.3.0...v1.4.0) Updates `h5py` from 3.12.1 to 3.13.0 - [Release notes](https://github.com/h5py/h5py/releases) - [Changelog](https://github.com/h5py/h5py/blob/master/docs/release_guide.rst) - [Commits](h5py/h5py@3.12.1...3.13.0) --- updated-dependencies: - dependency-name: numpy dependency-type: direct:development update-type: version-update:semver-minor dependency-group: requirements - dependency-name: numcodecs dependency-type: direct:development update-type: version-update:semver-minor dependency-group: requirements - dependency-name: setuptools-scm dependency-type: direct:development update-type: version-update:semver-minor dependency-group: requirements - dependency-name: pytest dependency-type: direct:development update-type: version-update:semver-patch dependency-group: requirements - dependency-name: lmdb dependency-type: direct:development update-type: version-update:semver-minor dependency-group: requirements - dependency-name: azure-storage-blob dependency-type: direct:development update-type: version-update:semver-minor dependency-group: requirements - dependency-name: redis dependency-type: direct:development update-type: version-update:semver-minor dependency-group: requirements - dependency-name: pymongo dependency-type: direct:development update-type: version-update:semver-minor dependency-group: requirements - dependency-name: pytest-cov dependency-type: direct:development update-type: version-update:semver-major dependency-group: requirements - dependency-name: pytest-doctestplus dependency-type: direct:development update-type: version-update:semver-minor dependency-group: requirements - dependency-name: h5py dependency-type: direct:development update-type: version-update:semver-minor dependency-group: requirements ... 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dependabot · 2025-03-03T05:16:27Z

Superseded by #2879.

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2.2.3 (Feb 13, 2025)

NumPy 2.2.3 Release Notes

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v0.15.1

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